Difference between revisions of "SATW - Do-it-yourself von Laborgeräten in der Bioanalytik"
| Line 131: | Line 131: | ||
<code> | <code> | ||
| − | /* | + | /* |
| − | TrinketKeyboard example | + | TrinketKeyboard example |
| − | For Trinket by Adafruit Industries | + | For Trinket by Adafruit Industries |
| − | */ | + | */ |
| − | #include <TrinketKeyboard.h> | + | #include <TrinketKeyboard.h> |
| − | #define PIN_LED 1 | + | #define PIN_LED 1 |
| − | #define PIN_BUTTON 0 | + | #define PIN_BUTTON 0 |
| − | const int analogInPin = 1; // Analog input pin that the potentiometer is attached to | + | const int analogInPin = 1; // Analog input pin that the potentiometer is attached to |
| − | int sensorValue = 0; // value read from the pot | + | int sensorValue = 0; // value read from the pot |
| − | void setup() | + | void setup() |
| − | { | + | { |
// button pins as inputs | // button pins as inputs | ||
pinMode(PIN_LED, OUTPUT); | pinMode(PIN_LED, OUTPUT); | ||
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// start USB stuff | // start USB stuff | ||
TrinketKeyboard.begin(); | TrinketKeyboard.begin(); | ||
| − | } | + | } |
| − | void loop() | + | void loop() |
| − | { | + | { |
TrinketKeyboard.poll(); | TrinketKeyboard.poll(); | ||
// the poll function must be called at least once every 10 ms | // the poll function must be called at least once every 10 ms | ||
| Line 177: | Line 177: | ||
} | } | ||
| − | } | + | } |
</code> | </code> | ||
Revision as of 09:11, 15 October 2014
Contents
Overview
Co-Development of a workshop on DIY laboratory instruments for bioanalytics, colorimetry, low-cost microcontrollers and simple DIY electronics, enzymatic assays. With a concept of "teach the teachers", we are looking into DIY lab-tools as means of a pedagogic tool for interdisciplinary thinking at the biomedical/engineering/molecular interface. Coproduced with SATW, Swiss Academy of Technical Sciences, Hackteria and FHNW, School for Lifesciences.
Unsere moderne Gesellschaft ist ohne Technologien nicht denkbar. Viele dieser Technologien werden nicht oder ungenügend verstanden. Eine eigene Urteilsbildung wird dadurch schwierig. Dies gilt auch für bioanalytische Methoden, welche heute in den unterschiedlichsten Bereichen eingesetzt werden. Es können chemische Substanzen, biologische Marker oder Gene in Lebensmitteln, der Umwelt oder in Flüssigkeiten und Geweben des menschlichen Körpers nachgewiesen werden. Die gemessenen Daten und deren Interpretation können für den einzelnen Menschen oder die Gesellschaft wichtig sein. Die Funktionsweise und Anwendungsmöglichkeiten dieser Geräte sind für Nichtspezialisten eine "black box". Wir möchten gerne das Verständnis für bioanalytische Messungen und Auswertungen nach dem Motto "bauen - messen - verstehen - reflektieren - vertrauen" verbessern. Im Rahmen dieses Projektes soll ein Workshop entwickelt und als Pilot mit interessierten Hochschuldozierenden (teach-the-teacher) durchgeführt werden.
Das Projekt wurde gefördert durch SATW, Schweizerische Akademie der Technischen Wissenschaften.
Team
Coaches
- Daniel Gygax, FHNW
- Marc Dusseiller, hackteria
- Urs Gaudenz, HSLU / hackteria
Weitere potentielle Teilnehmer
- Eric Kübler, FHNW
- Brian Degger (AU/UK) - confirmed
- Laura Suter-Dick, FHNW - confirmed
- Sciotti Michelangelo, FHNW - confirmed
- Christoph Stamm, FHNW
- Andreas Thommen, FHNW-students - confirmed
- Sachiko Hirosue, EPFL - confirmed, joins wed night for 2nd day
- Thomas Vetterli, EPFL - almost confirmed, details will follow
- EPFL? Renaud? ?
- Daniel Sciboz, HEAD - Interaction Design - no reply
- LAPASO netzwerk? dresden? oder studi?
- someone from the group of van der Meer, UNIL - sebatical
- (Alexandre de Spindler, ZHAW - Bioinformatik) - no reply
- Shintaro Miyazaki, Design (IXDM), FHNW http://www.shintaro-miyazaki.com/ - no time
- Rüdiger Trojok, openbioprojects / synergenen / hackteria - no time
- Silvio Dinardo, HLSU - no time
- Robin Scheibler - EPFL - no time
- 2 anderi Marcel Egli und Franziska Heinze - contacted later
Wir sollten noch weitere leute aus anderen Schulen mit dabei haben!
Sollen wir uns ausschliesslich auf deutsch sprechende teilnehmer konzentrieren?
Teach-the-Teachers Workshop
Fixed Date: 2 days 15-16. October 2014
Schedule:
- Arrival and Welcome: 12h
- Day 1: 13h - 18h - Building instruments
- Dinner / Discussion
- Day 2: 9h - 12h - Isolation and use of enzymes
- Lunch
- Day 2: 13:30 - 15h - Enzymes meet instruments
- Day 2: 15:30 - 19h - Discussion outlook
- (Voluntary Dinner for reflections)
Location
Raum 229
HLS, Hochschule für Lifescience, Gründenstrasse 40, Muttenz (BL)
Overview Pilot Workshop
- Was ist Do-it-Yourself und Open Hardware
- Einführung in Elektronik, LED, Licht-Sensoren, Messtechnik
- Prototyping
- Konzepte der Bioanalytik
- Isolieren und anwenden eines Enzyms (Phosphatase aus Kartoffeln)
- Test des DIY-Colorimeters mit Mikrokontroller - Vergleich mit dem DIY-Prototyp
- Diskussion und Feedback zu den Lehrkonzepten
- Ausblick
Voluntary Evening Reflection
informal discussion about the educational value of DIY and future summerschool concepts
Project Plan
SATW-DIY Kit
more about DIY turbidity meters
Bauteile Starter Set Basic für FPGA oder Arduino Projekte mit Box P00000178 1 Fr. 23.50 UV-LED im Transparenten Gehäuse / 5mm P00000103 1 Fr. 0.60 UV-LED im Transparenten Gehäuse / 3mm P00000519 1 Fr. 0.50 Kabel USB 2.0 A -> Mini 5-Pin 30cm Blau P00000527 1 Fr. 1.90 Platinenschalter 12 x 12 X 7 mm mit LED / Blau P00000632 1 Fr. 1.90 Lochraster-Steckplatine / Breadboard / Fullsize P00000473 1 Fr. 11.90 SparkFun Seitenschneider TOL-08794 1 Fr. 3.90 SparkFun Spitzzange TOL-08793 1 Fr. 3.90 Krokodil Klemmen - Multicolored 10 Stück P00000096 1 Fr. 5.90
PLAY-ZONE GmbH
Hinterbergstrasse 36
6330 Cham
Web: [1]
Zusätzliches Material aus Lab (Marc):
Coin Cell Batteries Small Multimeters Blue Tac Heissleimpistolen + Heissleim paar kleine Schraubenzieher ruber bands Brian
Turbidity Meter
Laser Cut Turbidity Sensor Holder
SATW-Kit turbidity meter
/* TrinketKeyboard example For Trinket by Adafruit Industries */
#include <TrinketKeyboard.h>
#define PIN_LED 1 #define PIN_BUTTON 0 const int analogInPin = 1; // Analog input pin that the potentiometer is attached to int sensorValue = 0; // value read from the pot
void setup()
{
// button pins as inputs
pinMode(PIN_LED, OUTPUT);
pinMode(PIN_BUTTON, INPUT);
// setting input pins to high means turning on internal pull-up resistors digitalWrite(PIN_LED, HIGH); digitalWrite(PIN_BUTTON, HIGH); // remember, the buttons are active-low, they read LOW when they are not pressed
// start USB stuff TrinketKeyboard.begin(); }
void loop()
{
TrinketKeyboard.poll();
// the poll function must be called at least once every 10 ms
// or cause a keystroke
// if it is not, then the computer may think that the device
// has stopped working, and give errors
if (digitalRead(PIN_BUTTON) == LOW)
{
sensorValue = analogRead(analogInPin);
// type out a string using the Print class
TrinketKeyboard.print("Sensor value ");
TrinketKeyboard.println(sensorValue);
} }
Pilot experiments
Recommended reading
can we even make our own DIY Atomic Force Microscope?
http://www.appropedia.org/Open-source_Lab
http://piratepad.net/LinksOnOpenSourceHardware
http://openlabtools.eng.cam.ac.uk/
http://opensource.com/education/14/2/teach-hacking-schools-open-education
http://opensource.com/education/14/9/back-school-open-education-week
Videos / Interviews
A final Quote
"There is a growing realization that innovation processes do not automatically follow from the results of research, whatever their potential may be. The “linear model,” which foresees that basic research will somehow find its way to being transferred or translated into applied research, which will in turn later appear on the market in the form of commercially viable products or processes, appears as an idealized version of what happened in a given historical period, namely, after World War II. Nor can today’s innovation processes be left to entrepreneurs alone, however strong their “restlessness” (in a Schumpeterian sense) may be. The omnipresent quest for innovation, caught up as it has been in a globalized world, is a hybrid of many elements. It includes the availability of venture capital, and the creativity of determined individuals as much as the flexibility of institutions and regulatory processes".
- Helga Nowotny, The Quest for Innovation and Cultures of Technology, 2006
https://www.berghahnbooks.com/books/freepdfs/NowotnyCultures_intro.pdf
